CDS

Accession Number TCMCG057C00415
gbkey CDS
Protein Id XP_018490919.1
Location complement(join(1811919..1811991,1812086..1812166,1812247..1812335,1812418..1812570,1812656..1812760,1812873..1813103,1813256..1813378,1813488..1813557,1813660..1813745,1813839..1813985,1814104..1814167,1814283..1814356,1814431..1814553,1814643..1815489,1822024..1822058,1822172..1822405,1822579..1822701,1822808..1822877,1822970..1823055,1823151..1823288,1823401..1823464,1823562..1823635,1823712..1823834,1823910..1824757,1824994..1825065,1825252..1825279))
Gene LOC108861532
GeneID 108861532
Organism Raphanus sativus

Protein

Length 1386aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018635417.1
Definition PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description SNF2 family N-terminal domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15083        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000109        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0000720        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006290        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGCGATTCCTCCATCCAACGAAGTTGACAACATGGAGGAAGACGTTGACGACGAAGCTTCTTCTGATGGAGATTCAGTCGACTCTGAGTTTCAAGCCGAGGAGGAGAAGGAGAAGGAGCTCCTTCCCCTGATCCAGTTCCTGCCCCTGCCAAATCCTGTCCCTGTCCCTGTTGATGACCCTGCTCCTGCACCTGTGCCTGTGCTGCCAAAGGGCACTAAAAGAAAAGCCTCCAGAGAGAAAGGCAAGCTGTTGTGGGAGATCTGGGAACAAGAAGATCAGAAATTGGTTGATGAACATAAGACAGAGGATGGAGATTTGGATCATCTGAATAATGTGATCACTGTAACTGCCGAGCCGCCTCCTGATTTGATCATGCCACTGTTAAGGTACCAAAAGGAGTTTTTAGCGTGGGCGATAAAACAGGAACAGTCAGTTGTTGCAGGAGGCATTCTCGCAGATGAGATGGGGATGGGGAAAACCATACAAGCCATCTCTCTTGTTCTTGCCAGACGTGAAGCTGCCAGGGCTCTGTTTAGAGAAGCAGTGGGGTGCACCCTTGTAATTTGTCCGCTTGCTGCTCTTTCTCACTGGTCAGATGAGATTGAGCGGTATACATCCCCCGGTAGCACCAAGGTCCTTGTATACCATGGGCCTAAGAGAGACAAGAATGCTGAAGAGTTCAAGAAGTACGACTTTGTATTGACAACTTATCCTACCGTTGAGAGTGAATACAGGGGATGCATCGTGTCGCTCAAGGAGCAGTGTGAATATTGCAACAAGTGGTTTTATCCTGCGAAGCTTGTTAACCACAAAAGTTATTATTGTGGGCCTTCGGCTGTGGAAACGAGTAAACAATCTAAGCAAAAGAAGAAGAAGATCCCTGACGCAGGGAAGAAGTCTATTTTGCACTCTATTAAGTGGAATCGGATCATCTTGGATGAGGCTCATATCATCAAAGAAAGACATAGGAACACTGCGAAAGCTGTTTTTGCTTTGAAGGCTTTCTATAGATGGGCTTTGAGCGGTACACCTCTCCAGAGTAATGTTGGAGATCTTTACTCCCTGATTCGCTTCCTGCAGATTCGTCCATACTCGTATTACTTTTGCAAGGACTGTGACTGTAGAATTCTTGATTACACTTCGCATGTAAGCTGTAGCAACTGCACTCATAATGCAGTCCGACATTTCTGTTGGTGGAACAAAAATGTGGCCAAAATTTACGGAAACGTGGAGCGGGAAAAGCGAGCCATGATATTACTTAAGCACAGAGTTCTGAAAGACATCTTCCTAAGACGTACTAAATTGGGCCGTACAGCTGATCTTTCCCTTCCTCCTAGAGTCATCACTCTGAGGCGGGATGCACTAGATATAAAAGAGTCTGATTACTATGAATCACTATACAAAGACATTAAAGCGCAATTTAATACGTACGTTGAGGCTGGGACATTAATGAAAAACTATACAAATGTATTTGTTCTTCTCATTCGTCTGAGACAGGCTGCTGATCATCCATACCTTGTGGTGTATTCACAATCTCGTGGTGCTGATGCTAACTTGAATGATGAGCACAAAATGGAGCACGAATGCGGTCTCTGCCACCAACCGGCTGAGGACAACGTTGTGACTTCTTGTGGACATGAGTTCTGTAAAGCTTGTTTGATTGATTTCTCTGCATCCCTGGGAAGCTTCAGCTGCCCGACATGCTTGGAACTACCGACTATGGATTGGACTACCGACGCTGACACAGAGCAACAGGCGGAAAGCAAGACAACGCCAAAAGGATTTAGAGCCTCAAGCATCTTAAATCTGATAAAGCTCGATGATTTTCAGACAAGTACAAAGATAGAGGCTTTGAGGGAAGAAATCAGATTCATGGTTGAAAGAGATGGGAAGAGCACACGTGTCACCAGAGAGAAAGGCACCCTCTTGTGGGAGATTTGGGAGAAAGAGGATCAGAGATGGATCACCGAACACATGACAGAGGACGTCGACTTGAATCAGCAGAACACATTAATCGCCGAAACCGCCGAGCCGCCTTCCGATCTGATCATGCCCTTACTAAGGTACCAGAAGGAGTTCTTAGCGTGGGCTTCGAAGCAGGAGCAATCAGTAAAGGGAGGCATTCTTGCGGACGAGATGGGGATGGGGAAAACCATACAAGCCATCTCTCTCGTTCTCGCCAAGCGTGACGTCGACAGGGCGGCTGTTTGTAAAGAAGCGGTGGGGTGCACGCTTGTGCTTTGTCCTCTCGTTGCTGTCTCTCAGTGGTTGAGCGAGATCGAGAGGTTTACATCCCCCGGAAGCACCAAGGTGCTTGTGTACCATGGGGCGAAGCGTGAGAAGAATGCTGAAGAGTTCAAGAAGTATGACTTTGTGTTGACGACTTATTCGACCGTTGAGAATGAGTTCAGGAAGTGCATGATGTCTCCCAAGGAGCAGTGTGAGTATTGCAACAAGTCGTTTTATCCTGCCAAGCTTATTATACACAATAAGTATTTTTGTGGGCCCCACGCTGTGAGAACGAGTAAACAGTCTAAGCAGCAGAAGAAGAAGGTCGCTACAGCGGCTGCTACGTCGTCCAAGCAAGGCAAGGAAGGTGATGAAGGAGAAGGTAGCAAGACGAAGCGATCCAGGAAGAAGAGTAAAAAAGCATTAGAGGAAGATCAGCTTGGTTCGGTGGATAGAAAGAAGTCTCTTTTGCATTCTATTACGTGGAACCGGATCATTTTGGATGAGGCTCATTACATCAAAGAAAGGCGTAGCAACACTGCGAGAGCTGTTTTTGCTTTGGAGGCTACCTATAGATGGGCTTTGAGTGGTACTCCGTTGCAGAATCGTGTTGGAGAGCTTTACTCTCTGATTCGCTTCCTGCAGATTCGTCCATACTCGTATTACTTTTGCAAGGACTGTGACTGTAGAATCCTTGATTACACTGCGCATGTAAGCTGCAGCAGCTGCACTCATAATGCAGTGCGGCATTTCTGTTGGTGGAACAAGTATGTGGCCAGACCAATAACAGCATATGGAGGCCACGAAGTGGGTAAGAGAGCCATGGTTTTGCTTAAACACAAAGTTCTGAAAGACATCCTCATAAGACGTACTAAGCTGGGCCGGGCAGCTGATCTTGCCCTTCCTCCTAGATTCATCACATTGAGGCGGGATTCACTAGATATAAAAGAGTTTGATTACTATGAATCACTATACCAAAACAGCCAAGCGCAATTTAATACGTATATTGAGGCTGGGACATTGATGAATAACTATGCACATATATTTGATCTTCTCACTCGTCTGAGACAGGCTGTTGATCATCCATACCTTGTGGTGTATTCCGCTTCTAGTGGAGAAAACGCTAACTTGAATAGTGAGAACAAAAAGGAGCAAGAGTGCGGTCTCTGCCACGAACCGGCTGAGGACAGTGTTGTAACTTCCTGTGCACACGTGTTCTGTAAAGCTTGTTTGATTGATTTCTCTGCATCCCTGGGACAAGTCAGCTGCCCGACATGCTCAAAACTACTGACTGTGGATTGGACTACCAAAGCTGGCACAGAGCAACATGCAAACAAGACAACACTAAAAGGATTTAGAGCCTCAAGCATCTTAAATCGGATAAAGCTCGATGATTTTCAGACAAGTACAAAAATAGAGGCTTTGAGGGAAGAAATAAGGTTCATGATTGAAAGAGATGGGTCTGCTAAAGCAATAGTTTTCAGCCAGTTCACATCCTTTTTGGATCTGATAAATTACACCCTCGGGAAGTGTGGGGTTGGTTGCGCTCAACTGGTGGGAAGCATGTCCATGGCAGCTAGAGATGCTGCCATCAATAAATTCAAAGAAGATCCAGATTGCAGAGTTTTCTTAATGAGTTTGAAAGCTGGAGGAGTTGCTCTCAACCTAACAGTCGCCTCACATGTGTTCATGATGGACCCGTGGTGGAACCCAGCGGTTGAGAAGCAAGCGCAGGACAGAATACATAGGATCGGACAGTACAAGCCGATCAGGGTTGTGAGATTCATAATAGAGAACACAGTGGAGGAAAGGATCCTTAAGCTTCAAAAGAAGAAGGAACTTGTGTTTGAAGGGACCGTTGGTGGTTCTCAGGAAGCCATAGGAAAGTTGACCGCAGAAGACATGAGGTTTCTGTTTACCACCTAA
Protein:  
MEAIPPSNEVDNMEEDVDDEASSDGDSVDSEFQAEEEKEKELLPLIQFLPLPNPVPVPVDDPAPAPVPVLPKGTKRKASREKGKLLWEIWEQEDQKLVDEHKTEDGDLDHLNNVITVTAEPPPDLIMPLLRYQKEFLAWAIKQEQSVVAGGILADEMGMGKTIQAISLVLARREAARALFREAVGCTLVICPLAALSHWSDEIERYTSPGSTKVLVYHGPKRDKNAEEFKKYDFVLTTYPTVESEYRGCIVSLKEQCEYCNKWFYPAKLVNHKSYYCGPSAVETSKQSKQKKKKIPDAGKKSILHSIKWNRIILDEAHIIKERHRNTAKAVFALKAFYRWALSGTPLQSNVGDLYSLIRFLQIRPYSYYFCKDCDCRILDYTSHVSCSNCTHNAVRHFCWWNKNVAKIYGNVEREKRAMILLKHRVLKDIFLRRTKLGRTADLSLPPRVITLRRDALDIKESDYYESLYKDIKAQFNTYVEAGTLMKNYTNVFVLLIRLRQAADHPYLVVYSQSRGADANLNDEHKMEHECGLCHQPAEDNVVTSCGHEFCKACLIDFSASLGSFSCPTCLELPTMDWTTDADTEQQAESKTTPKGFRASSILNLIKLDDFQTSTKIEALREEIRFMVERDGKSTRVTREKGTLLWEIWEKEDQRWITEHMTEDVDLNQQNTLIAETAEPPSDLIMPLLRYQKEFLAWASKQEQSVKGGILADEMGMGKTIQAISLVLAKRDVDRAAVCKEAVGCTLVLCPLVAVSQWLSEIERFTSPGSTKVLVYHGAKREKNAEEFKKYDFVLTTYSTVENEFRKCMMSPKEQCEYCNKSFYPAKLIIHNKYFCGPHAVRTSKQSKQQKKKVATAAATSSKQGKEGDEGEGSKTKRSRKKSKKALEEDQLGSVDRKKSLLHSITWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYTAHVSCSSCTHNAVRHFCWWNKYVARPITAYGGHEVGKRAMVLLKHKVLKDILIRRTKLGRAADLALPPRFITLRRDSLDIKEFDYYESLYQNSQAQFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSASSGENANLNSENKKEQECGLCHEPAEDSVVTSCAHVFCKACLIDFSASLGQVSCPTCSKLLTVDWTTKAGTEQHANKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLINYTLGKCGVGCAQLVGSMSMAARDAAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVEKQAQDRIHRIGQYKPIRVVRFIIENTVEERILKLQKKKELVFEGTVGGSQEAIGKLTAEDMRFLFTT